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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|195873641, gi...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDMAKNLIL WLVIAVVLMS VFQSFGPSES NGRKVDYSTF LQEVNQDQVR EARINGREIN  60
   61 VTKKDSNRYT TYIPINDPKL LDNLLTKNVK VVGEPPEEPS LLASIFISWF PMLLLIGVWI 120
  121 FFMRQMQGGG GKGAMSFGKS KARMLTEDQI KTTFADVAGC DEAKEEVAEL VEYLREPSRF 180
  181 QKLGGKIPKG VLMVGPPGTG KTLLAKAIAG EAKVPFFTIS GSDFVEMFVG VGASRVRDMF 240
  241 EQAKKAAPCI IFIDEIDAVG RQRGAGLGGG HDEREQTLNQ MLVEMDGFEG NEGIIVIAAT 300
  301 NRPDVLDPAL LRPGRFDRQV VVGLPDVRGR EQILKVHMRR VPLATDIDAA IIARGTPGFS 360
  361 GADLANLVNE AALFAARGNK RVVSMVEFEK AKDKIMMGAE RRSMVMTEAQ KESTAYHEAG 420
  421 HAIIGRLVPE HDPVHKVTII PRGRALGVTF FLPEGDAISA SRQKLESQIS TLYGGRLAEE 480
  481 IIYGVEHVST GASNDIKVAT NLARNMVTQW GFSEKLGPLL YAEEEGEVFL GRSVAKAKHM 540
  541 SDETARIIDQ EVKALIERNY NRARQILTDN MDILHAMKDA LMKYETIDAP QIDDLMARRE 600
  601 VRPPAGWEDP NGTNNSDSNG TPQAPRPVDE PRTPNPGNTM SEQLGDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle