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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Lerp-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCSLQKDCA APTQENFRQM RFPIVISLLL LLFCSGESVA ADAANQLKFS TTECKLKEPI  60
   61 YGSTFDFSGL HSDLAHVVKS MNIGGDQFEF NICGNLSRTC NGESNVAACL KRQGKEYILG 120
  121 RQHELFYNNG NMFLKYKSGA KCDNGTADKP NYQLHVMFSC DYTLDAQPMH VTPYANEVCS 180
  181 FYISYRTPLA CLSIPEGLQS NSCRVGDTKS NGTFDLMPLS DSNYHTSNRQ GAFFVINVCK 240
  241 PVLYGENSMC PAGSSVCLFD SKATNPKERF INFGNVQTHP VVEKGQLLLR HESPTPCAKN 300
  301 SSANYTSVIY FSCDKFIRNA HPEFAGLGAD SCTYQFNFAT PLACNDLKPC TAFTSTNELL 360
  361 DLSSLSSKPA RTLLKDGKNY TIAVCAHAGA PCQENGGACY EQNSTTISLG NSNSQLRFNQ 420
  421 TGSLYLLYED GAECSTATGM RRWSTKIEFV CANNATKDNG ASTAGGSDSL KIIEDSNCQL 480
  481 LIQYQTPLAC REPIRCKATT YVDHTNDGLG SSGDELIDLT PLISATDNYE ARVELPASME 540
  541 HLVPKTTKFF LNVCRPLVPK YQLGCAGGSA ACMAKVTAAG APEEERSMGF PLVSLTQRNR 600
  601 TFAELAYLKG DPCPTDNTSE LSTHILFNCN MRAGRGQPVL RSVEDCAYRF EWETNVFCPP 660
  661 HECTFSADTC DLVHDELGRR FNFKSAPFTK DGKIEIDYNA TKMSVNICGA HRKAMTDYSQ 720
  721 ALVNIFFTHE SPNCGREGTM NVQIRLICSD QTESSSTISS DQQCNLLYVQ RTPSICEFLS 780
  781 LGATQQNFES NGSTSSSTSS SSTSTTTSTT TQASPAAILG AILSVTFCVT CLGLLAFSPA 840
  841 RRQRIRRLFR RSNSAVRYSR VQSNEEANLL LEPNGEFTES DDDMLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle