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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57637964, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRYLKFVK PYRYRIIATI IVGIIKFGIP MLIPLLIKYA IDGVINNHSL TNQEKFSHLG  60
   61 VAIGIALFIF LIVRPPIEFI RQYLAQWTSN KILYDIRKQL YNHLQALSVR FYANNQVGQV 120
  121 ISRVINDVEQ TKDFILTGLM NIWLDCITII IALSIMFFLD VKLTFAAIFI FPFYILTVYF 180
  181 FFGRLRKLTR VRSQALAEVQ GFLHERVQGM SVIKSFAIED NEAKNFDNHN KNFLQRAFQH 240
  241 TRWNAYSFAA INTVTDLGPI IVIGVGSYLA ITGSITVGTL AAFVGYLEQL FGPLRRLVSS 300
  301 FTTLTQSFAS MDRVFQLMDE DYDIKNGIGA QPIKISKGQI DLKHVSFKYN ENEKEVLHDI 360
  361 NLTINKGETV AFVGMSGGGK STLINLIPRF YDVTQGEILI DHHNVKDFLT GSLRNQIGLV 420
  421 QQDNILFSDT VKENILLGRP DATDDEVVEA AKMANAHDFI SNLPNGYDTE VGERGVKLSG 480
  481 GQKQRLSIAR IFLNNPPVLI LDEATSALDL ESEAIIQEAL DVLSKDRTTL IVAHRLSTIT 540
  541 HADRIVVMEN GRIVETGTHQ QLINKRGAYE HLYSIQNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle