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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57865971, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNNNRIKRF SIRKYAVGVV SIITGATIFI GGQQAQAAET SVQHADAHPE DSQTTQQLKN  60
   61 DKVEETLKAS KQGNADSQQV QTIDQSKTNQ NNQHSVAESA QLKSDETANQ PKKEEGSSVK 120
  121 QDVQPSKNVN QQDVATQSNE RENNDIKDEG QTSKTSNQHI QSSNSHNQST GTKDSYSEEI 180
  181 DQPLVKLQKP SNDSTYQTQS KTKQDSSKQL PQEKTTKRQI QTTENEQTTK VDSKKANDTQ 240
  241 NVEKHTQEPK NDTSTSQKNH QQVATKEQSN RSTTRETQKQ SANANQNHQS THQAQFKNQY 300
  301 PVVFVHGFLG FAGDNQFSLA PKYWGGTKYN IDRNLTNEGY NVHEANIGAF SSNYDRAVEL 360
  361 YYYVKGGRVD YGAAHAAKYG HHRYGRTYKG IMRDWEPGKK IHFIGHSMGG QTIRQMEEFL 420
  421 RNGNQEEIEY QRQHGGTISD LFTGGKDNMV ASITTLGTPH NGTPAADKIG TRKLVKETIN 480
  481 RIGRLSGGKD VDIDLGFSQW GLKQQPNESY IDYAERVSKS KIWNTEDQAV NDLTTQGAEK 540
  541 INQQTSLNPN IVYTTYTGSA THTGPLGNEL PNSSEILLLN LTSRIIGKDA NKEIRPNDGV 600
  601 VPVISSQHPS NQAFKKVDDH TPATDKGVWQ VRPVQHDWDH LDLVGMDAFD LTHTGRELGQ 660
  661 FYLGIMDNIM RIEEADGITN K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle