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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Lerp-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCSLQKDCA APTQENFRQQ MRFPIVISLL LLLFCSGESV AADAANQLKF STTECKLKEP  60
   61 IYGSTFDFSG LHSDLAHVVK SMNIGGDQFE FNICGNLSRT CNGESNVAAC LKRQGKEYIL 120
  121 GRQHELFYNN GNMFLKYKSG AKCDNGTADK PNYQLHVMFS CDYTLDAQPM HVTPYANEVC 180
  181 SFYISYRTPL ACLSIPEGLQ SNSCRVGDTK SNGTFDLMPL SDSNYHTSNR QGAFFVINVC 240
  241 KPVLYGENSM CPAGSSVCLF DSKATNPKER FINFGNVQTH PVVEKGQLLL RHESPTPCAK 300
  301 NSSANYTSVI YFSCDKFIRN AHPEFAGLGA DSCTYQFNFA TPLACNDLKP CTAFTSTNEL 360
  361 LDLSSLSSKP ARTLLKDGKN YTIAVCAHAG APCQENGGAC YEQNSTTISL GNSNSQLRFN 420
  421 QTGSLYLLYE DGAECSTATG MRRWSTKIEF VCANNATKDN GASTAGGSDS LKIIEDSNCQ 480
  481 LLIQYQTPLA CREPIRCKAT TYVDHTNDGL GSSGDELIDL TPLISATDNY EARVELPASM 540
  541 EHLVPKTTKF FLNVCRPLVP KYQLGCAGGS AACMAKVTAA GAPEEERSMG FPLVSLTQRN 600
  601 RTFAELAYLK GDPCPTDNTS ELSTHILFNC NMRAGRGQPV LRSVEDCAYR FEWETNVFCP 660
  661 PHECTFSADT CDLVHDELGR RFNFKSAPFT KDGKIEIDYN ATKMSVNICG AHRKAMTDYS 720
  721 QALVNIFFTH ESPNCGREGT MNVQIRLICS DQTESSSTIS SDQQCNLLYV QRTPSICEFL 780
  781 SLGATQQNFE SNGSTSSSTS SSSTSTTTST TTQASPAAIL GAILSVTFCV TCLGLLAFSP 840
  841 ARRQRIRRLF RRSNSAVRYS RVQSNEEANL LLEPNGEFTE SDDDMLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle