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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0292804, FBp...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGLCEKLMT HFAVILTAFS FSQPLLLLLI CGPHGGTFPS TSIHWAEASA ADEAVGKWAT  60
   61 QFGDELFALA QKITKSQEIK EKYKEYNARV ELKNGTELIK SITKNVGRML ARKMDAVRCI 120
  121 QERAEYVNEN FEFNLTYALQ NFTYFSSKYS TFNGNSSEEL EPNEAEFAWM YRNMELNPDT 180
  181 HFYNTPVDTE HSSVHVPSNI WDRSERVLKT IMWSEHLDEV FRQNYQSDPA LSWQYFGSDT 240
  241 GILRHYPAAQ WTDTRPNRDD ADTYDCRKRS WYIETATCSK DIVILLDHSG SMTGFRHHVA 300
  301 KFTIRSILDT FSNNDFFTIL RYSSEVNDII PCFNGALVQA TPENIEVFNQ QIEQLDDPEG 360
  361 YANLTLAYET AFQLLRKYYD SRHCVTNSTC NQAIMLVTDG VAGNTTEVFQ KYNWGNGENG 420
  421 TSQMDTRVFT YLLGKEVTKV REIQWMACLN RGYYSHVQTL DEVHEEVLKY VDVIATPLVL 480
  481 QNEQHPPTWT HAFTDKTYDP KTSNEKRPRL MISVGVPAFD RFYRHANSTN PRARLLGVAG 540
  541 TDVPVEDIDK LTLPYKLGVN GYSFVVSNNG YVLLHPDLRP IGTNGKMNPN YNSIDFTEVE 600
  601 HLFEDQSPRE PGESILHIRN AMVRHEANEF KSISVKFHYD KMRRVSEEKQ DYFFAPLPNT 660
  661 PFTLGIVMPS EYGKTWIKVG EEVDKNKHMK INISDFFIGE NWKVHPDWVY CKYHYLEGHE 720
  721 FKTPEAELRE FLAKMQNDWK WSEQYAEDES DWDDKDDLNC GRKTLGDDAY YCNKELVNLL 780
  781 IFDAKVTNSS YGVWRFESDE ERQLIERFRA DLRFVATMSG LTRWQFIFGE VEVDTDREFG 840
  841 DYHTTAIDET WYKSAILQHH EDRAESFVYS VKYYDDPMED SEVKVTASHA IFPRDGGKEA 900
  901 PACVVGFQFS HARMWERFFN ITAVDHCNHC LPICTDDDVD CVVIDNNAYI VIGQNINTTG 960
  961 KFFGEFHGDV MTAMVERGIF LSIEVYDYQE QCKEEPKAGS DGHGLLHPLR LLSLGWKYLV1020
 1021 GRLFFEYQRI QWWADGAPFM EYTDEIEDEY VAVGDGGKSS ASKPKDDSDD ENAMFDEPEP1080
 1081 DPIYKACDKR STLYALQPSA LVGINDFVEA PSTRPFLVKK IPNSNLVLVV VNVLMPSRSV1140
 1141 RLTTEPQRME YDKEFPCYKL NMSFYERRRI EECYTVHEDE ELYTYCGNAS RLVLTLQLMP1200
 1201 LTIILVFYLT HSFMR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle