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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62531162
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENIVSAVEPG AFNNLFNLRT LGLRSNRLKL IPLGVFTGLS NLTKLDISEN KIVILLDYMF  60
   61 QDLYNLKSLE VGDNDLVYIS HRAFSGLNSL EQLTLEKCNL TSIPTEALSH LHGLIVLRLR 120
  121 HLNINAIRDY SFKRLYRLKV LEISHWPYLD TMTPNCLYGL NLTSLSITHC NLTAVPYLAV 180
  181 RHLVYLRFLN LSYNPIGTIE GSMLHELLRL QEIQLVGGQL AVVEPYAFRG LNYLRVLNVS 240
  241 GNQLTTLEES AFHSVGNLET LILDSNPLAC DCRLLWVFRR RWRLNFNRQQ PTCATPEFVQ 300
  301 GKEFKDFPDV LLPNYFTCRR AHIRDRKAQQ VFVDEGHTVQ FVCRADGDPP PAILWLSPRK 360
  361 HLVSAKSNGR LTVFPDGTLE VRYAQVQDNG TYLCIAANAG GNDSMPAHLH VRSYSPDWPH 420
  421 QPNKTFAFIS NQPGEGEANS TRATVPFPFD IKTLIIATTM GFISFLGVVL FCLVLLFLWS 480
  481 RGKGNTKHNI EIEYVPRKSD AGISSADAPR KFNMKMI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle