YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84623095, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQESSAPLL FADLGLSGAV MRAVANVGYE SPSPIQAATI PALLAGRDVL GQAQTGTGKT  60
   61 AAFALPVLSN ADLNQVKPQA LVLAPTRELA IQVAEAFQKY AEAIPGFRVL PVYGGQPYAQ 120
  121 QLSALKRGVH VVVGTPGRVI DHLDRGTLDL SQLKTLVLDE ADEMLRMGFI DDVEAVLKKL 180
  181 PEKRQVALFS ATMPPAIRRI AQTYLKDPAE VIIAAKTTTS ANIRQRYWWV SGLHKLDALT 240
  241 RILEVEPFDG MIIFARTKAG TEELAQKLQA RGLAAAAING DMQQAAREKT IAQLKDGKLD 300
  301 ILVATDVAAR GLDVERISHV LNYDIPYDTE SYVHRIGRTG RAGRTGDAIL FVTLREKGML 360
  361 RSIERATRQP IEEMQLPSVD AVNDTRVARF MTRITETLAG GQIDMYRDLL QRYEAENNVP 420
  421 AIDIAAAMAK LLQGDAPFLL TPPVRGARED AAPRERHQRA DRGDRPRFEP KFERGPRADG 480
  481 ERAPRPPRGD DAGGERPRRD PVAPRGEPEL GMESYRIEVG HSHGVKPANI VGAIANEAGL 540
  541 ESRYIGRIDI QDDYSILDLP ADMPRELLTH LKKVWVSGQQ LNMRKLEEGE AAASPAKPRF 600
  601 PRGGKPSGRS NGPVRPMDRA GAPHRKGPPK PRGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle