YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	F175A_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGESTLGVL SGFVLGALTF QHLNTDSDTE GLLLGEMKGE AKNSITDSQM DSVKVVYTID  60
   61 IQKYIPCYRL FSFYNSLGEV NEHALKKILS NVKKTVVGWY KFRRHSDQIM TFREQLLHRN 120
  121 LQTHLSSPEL VFLLLTPSIT TESCCTHCLE HGLYKPQSGL FHKVPLVVTN LGMSDQLGYK 180
  181 TESVSCTSTV FSRAVRTYSS QFFNEDGSLK EVRKINEMYA AIQEELKTIC QKVEQSEREV 240
  241 EKLLMDVNRL KEVRKKQQAQ AKGAGEKSQN HPQENILLCQ ALRTFFPESR VLHSCVISLK 300
  301 NRHISHSGCN TDHHLDVVDK LTLMVEYVYS PEASPAPAAP LSKRKALDTQ DQWPAKRPRL 360
  361 LESESRPGPA FRGSHQDKAS SSSLDIDTEV GSPEDDTDYP RSPTF

Type	Start	End	Confidence
Signal Peptide	1	19	0.58
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	405	0.99