YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114051746, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPLLILAFV GVAVAAPFDD DDKIVGGYTC EENSVPYQVS LNSGYHFCGG SLINEQWVVS  60
   61 AAHCYKTRIQ VRLGEHNIEV LEGTEQFINA AKIIRHPDYD RKTLNNDILL IKLSSPAVIN 120
  121 ARVSTISLPT APPAAGAEAL ISGWGNTLSS GADYPDELQC LEAPVLSQAE CEASYPGKIT 180
  181 SNMFCVGFLE GGKDSCQGDS GGPVVSNGQL QGIVSWGYGC AQKNRPGVYT KVYNYVDWIR 240
  241 DTIAANS

Type	Start	End	Confidence
Signal Peptide	1	15	0.99
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	247	0.99