YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56384967
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKNRGVLPL AMLVLSGSFL LSGCGEEQKQ GGEMPPPDVK VVTLKAAPLT VSTELPGRTS  60
   61 AYRIAEVRPQ VGGIILKRNY KEGSDVKEGE SLYQIDPAPF QATLNSAQAE LAKAKANAEL 120
  121 ARLTVNRYKP LLGTNYISRQ DYDEAVSTHA QAQAAVQAAQ AAVQTAQINL NYTKVTSPIA 180
  181 GLSGKSNVTE GALVATGQTQ PLTLVQQIDP IYVDVTQSSD DYLRLKQEIA SGAVDKEQGK 240
  241 VAVSLVTAEN KDYTHKGYLE FSDVTVDETT GSITMRAVFP NPQESLLPGM FVRARVDEGV 300
  301 RPDAILVPQE GVIRTAKGGA VVNVVNAKNE IEVRPVTVGQ SYGNKWLITS GVNDGERVVV 360
  361 EGFQKIKAGA AVKATEADLN AQPAAAPKNT ESAQKSQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.95
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	397	0.99