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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56708853, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRTRVVVI GGGIAGCSTL YHLTQEGWTD VVLVERNELT SGTTWHSAAQ VTNFGMNQTM  60
   61 VGLKSHSIAL YKALAENPEY PINYHHGDGG IRLANTPEQM QGYRHFTSMA RGMDVHFEVI 120
  121 DAQECARRHP LISTENLLGG LWDPLDGDID PAQLCQALAY HARKAGAEVY RNTPVTALTQ 180
  181 HKDDTWTVHT ENGDIDCDIV VNACGYRVNE VGAMMGVHHP VASMEHQYFL TEDIPEIVAA 240
  241 GHRMPLIRCP ISDYYCRQEK SGLLIGFYEQ DCQTWGMDGI DPNFVNALCP DDLDRVMDVL 300
  301 EGAFARMPAL RETGIRSIVN GPITYTIDGA PLIGPIPGKR NAFCAIGLRA GLGEGGGHGW 360
  361 LLAQMIVHGE ACYDTWCIDP RRFTGHANVE LTALKAIEDY QNEFRFHFPH EHRPAGRPAK 420
  421 TTPLTPVLAA EGAEFTVVNG WERVDYIKPS PEFHPSLTFD FDEAFDVVAA EVKAVQNSVG 480
  481 LAEVNGFNRI EITGSGRHAF LDRMFCGSVT KRAGRVGLGY LLNHHGMIKA EATIANLPAS 540
  541 DRGPARVWYG SAAASEFHDM DWLSQHIQPG EDVQLRSLTN DQTILVLAGP RARAVLSACA 600
  601 RGDWSREAFP WLSVRECFIG FAPATVMGVS FSGELAYEIH IPNASLYAAY LALRKAGEAH 660
  661 GLTLFGARAV ESMRMEKGFL HWKADLITEF DPFETGLSRF VKLDKGAFIG KPALLDRQSD 720
  721 GPRKMLVTLQ IATDRAPARG GASLMVGQRV VGTVTSGDWG HRVGMNLAYA FVDPELAEPG 780
  781 SEMMLDLCGD MVAARVIAPS PYDPDHARMR G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle