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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71730229, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMNDLTKNV LLWVVVAVVL MVVFQSFSPR IGGVIGNEPI TYTQFLNEVD SGRIKSVNYT  60
   61 DESGLTVNAI RFKRTDGSEG LVYGPRDDKL VDVLYTKNIE MTRQKPSSGP GFWSLVLNFL 120
  121 PVILIIGFWV FIMRQMQGGG AKGAMSFGKS RAKLQGDDQI KITFADVAGC DEAKEEVGEL 180
  181 VDFLRDPTKF TKLGGKIPRG VLMVGPPGTG KTLLAKAIAG EAKVPFFSIS GSDFVEMFVG 240
  241 VGASRVRDMF EQAKKHAPCI IFIDEIDAVG RHRGAGLGGG HDEREQTLNQ LLVEMDGFEG 300
  301 GEGVIVIAAT NRPDVLDPAL LRPGRFDRQV VVALPDVKGR EQILGVHMRK LLLANDVEPL 360
  361 VIARGTPGFS GADLANLCNE AALFAARSNE KEVRMNHFDA ARDKILMGTE RRSMAMSEEE 420
  421 KTLTAYHEAG HAIVGRLVPE HDPVYKVTII PRGRALGVTM YLPEGDKYSI NKVAIQSQLC 480
  481 SLYGGRVAEE LIFGEDKVTT GASNDIERVT KMARNMVTKW GLSDELGPVA YGEEEDEVFL 540
  541 GRSVTQHKNV SDETARKIDE VVRSILDKAY ARTKRILADN LDKLHAMSQL LLQYETIDAP 600
  601 QIDAIMEGRE PPPPVGWGKP SDNGSDDDMS KPRPLTTIVV PAEQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle