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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GDT2_DICDI
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.21
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYILYILLI LIIFSINNTF SIGSFVYTPD GYYNLYRINK FENFSKIPTK ANSVNVEPHE  60
   61 LYYPDICDSA LKNKNSNEFS IDNFPGSPFL KANIKITKGS NMTLDPLLSI HPSYINILCI 120
  121 EGSFTAGSQQ TLTLGGIIVL PGGNFHCNNC VLQFVDLSST IIKIDPFGFL PGILSLGGSI 180
  181 SLIGSQRILY SAKPIEDNVL EVNDISTLDP FNGFNVSIVS DSFPNVRTSR FTYNKNKLEM 240
  241 QDLTIPTTDL NIKLFFNDSG SLKFGGISTR TKSSIYITGD TKLHIENYLL DSIGKTSNKE 300
  301 YDDTKLTFSS DNPNNVTDII IGKNQRFRNS LYIEFSNSVT IKNSVIIGNT GSSRSSLVFF 360
  361 QSNVNISGNL IVGTAGSSMI AQYGTEYIES SNNYFSLVLP NEFPTSPAFM DYGHEGNGIY 420
  421 SLSPNIFSTN DIFNGQKILY NFNFISRENV TGFDKDCFAP CDINSIVVPS LSQEPIDFSK 480
  481 NLVNPISINP VDYFLIVNSD EELKNTFFTI KDSTISSKII VNLKGSGLVL KNIIGVNNFK 540
  541 LTGQVKRLDI YDSFFGSSTT PSLGDNGIKS SAVIIKNSSF YIDDFQLQNN QIYGSSIVPY 600
  601 LYELLNVDEF ILVDSIFPTS QYQIPVGGKL DLIVKLVIIS PVISRITCEL ESDNETITSS 660
  661 AISESVNKEC KFPLTFKNDG SVNLKVTVKL KNVGDSEIMY IINFPKITIF SNYSFYSGWS 720
  721 MENSTENGII SVDGNSFKKG CSISSNDNSN NCTISNNIKY ITNLPKLNIS NDLNELFLNG 780
  781 ITSINSNELV TITTRIDSET KYYQIQLFFI HQPIDDQPTP LSIYIENQPV FLLEPLESNS 840
  841 APIFKNLTFN FDNINSLENI NISFATRGNT YLTSMAIYSS LVIEYPIPVE KINLLPIIVP 900
  901 ICVTVLVLLS ILIVFFGARY YKHKKRRRLE IAVFGVELYS KKPSNNKSPV PSTPLIINSN 960
  961 QEQSSSNHIS ITVNRNSDIQ TQSENNNLEP TTVETTTTTT TTAAGAILQT NVTLEMENLE1020
 1021 IKPIINNNEP FFEDYSDEYD DSSDGAELNE DDVEDYINII RGGNIKIEAE GELFVRQFER1080
 1081 NTFDQEFFEY KKSKIPSPHL VPSLAHGDFI ENPLNIIDIL LDPVTNEIPL EHYLKTYKNR1140
 1141 NGQSGKYRTN TQTHVLIADT IFQHCNDPDL PVSVSPYICD FGMNGRKSDL GEVCHDTITF1200
 1201 KNKLSEPLYA LFLFPEGDDS SITSSPFQSI ELKPNVETSI SLSVTLFSTT KYNEKVIVRF1260
 1261 ETLDVKQSWS TFVFLRLESE LTNIIDFNEI IIKNYISEGT FGIVYRGIWR SSPVAVKLLK1320
 1321 NEYVDHDEIE KEISLLERLR HPNILLYVGR FIFSGIHGIV TDYCSKGCLS KYIHENKYKI1380
 1381 TIIQKIRILI DISKACAYLH RNGITHRDLK PENILITSLN PKSLVCAKVS DFGTSKETNE1440
 1441 RYNLQTRRGT VAYMSNEILS QGSYTKSTDI YSFGMLCYEL FSERIPYYSE PHWRIRELVL1500
 1501 KNERPSLDQE IFKDTDISDI VTRCWSKNPS QRPTFDYLSK YLKHLLKKYD INNIIYDKDK1560
 1561 KNKKKNKNNN NNNNNNNNNN NNNNNNNNNN DDHDDNNNNI NDSDCDNNKN NNNNNNNNNN1620
 1621 NNNNNNNNNN NNNNNNN

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