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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60470128
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYRKFVFLL LTLCVFGQSF VQSRTVTLDG TSCGKCQLES MISSLAGGAL SSLDDVVIKG  60
   61 VPNAVYTIAK PVLCRAMNIT SGTVNLASTI DLRGNLWIAS GASMIITGAI KSVSNVFVTV 120
  121 DGIVTVRGGA SLIANLNVNG KLNIEAGSLT VNGFIASATA LPIVSGAGQL INNGKCIYNA 180
  181 VPTILGTGQF IVNGATQLSK GITCQDKAIL SIASKATVDI LANSIFAAPI AIASNAEIKL 240
  241 TSGNHVFNGV NGATNSIMTI VNGAVSLNAP STCHTVDLTG AGSILVNSNS VINTIKAAAT 300
  301 AQVNVAKAGL LNINGIADIK AILNLKDTAN VVVAAKATAN LLGGVNAIAQ SQIQAMDSSI 360
  361 LNMGKTCTLS QPIIMGKQAV MNAMEGTHSW TQGITSQVNS IINIGSKSNI IANKDCKFGI 420
  421 LNLATGSNVN INSGTTIVQG ALTTASNSAL AVTNAVLNLK ATSVIKSALS INAQAKAIFD 480
  481 SKVDLLAGIT THIDSTIDIN HNVNILASST IKSVTNLNAN GLLVFGGSKG VSHSCSGDIT 540
  541 SDAKSTLNVV AGAILHLDGD AVLAGTHKLV DGSQIIVNGN ANIISGLTST GSALSHFTVG 600
  601 PTGSCVLGNT PMPTLPSFPT IPGFPSFPSA SQKSWSHHGH SNNGNNGNNG NNGNNGNNGN 660
  661 NGNNGNNGNN NGNNGNNGNN GNNGNNGNNG NNGNNGNNGN NGNNGNNGNN GQSSGSNQMP 720
  721 SSTISFPSSG SASSGSFPSS STGSNQMPSS TISFPSSGSA SSGSFPSSGS ASSGSFPSSG 780
  781 SSNNGQTSGK STTTTTTTSS SSSSSSITNI NGNVIIQTGG SLDVLGKCNV GSTVQNLGSL 840
  841 TLTQPMVIAG NAFTQTSATA VLNMVAGGSI ESKVIDFTHG TIQGVGALKC GTCNFANKIA 900
  901 ANLNIVGNVK MAATATVYAN IDALMSITTS TQTSISQSST KTVNGKTTTQ SSSSSSSSIS 960
  961 KQFVPMIVCS GTADVAGNLN VVASEANQAK IASGTVFKFI SAPVVKGNVS SVSCLTSSTA1020
 1021 AAAQQAAGAA AAAAQKAAMA AASKVWSIVN SPCNCECGLK RL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle