YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57234071, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKADYLIVGC SAGGIGAAEA IREVDRDGSI VIVGEEPYLA YSRPMIAKYL SGQKTVEKIL  60
   61 FRRPEFYTNN NITCLTGVKA EAVDTTAHEV SLSNGEKVAY GKLLLAPGGK PIVPPIDGAN 120
  121 KAGVFNFINM KDASLIDSYV KAENVKKAVI IGGGLIGMSA ADALTKLGIE VDIIELKGHI 180
  181 LNTILDEAAG KIAAQTVTSY GVKLNTGRTV SKVLGLHKVS GVELDNGHQI ESQMLVIAIG 240
  241 VIPRTELCKA AGLEVNRGVV VNDNMRTSSP DVYACGDACE SFDFIYNSRR VTPIWPNAYI 300
  301 GGRIAGYNMA GLETTYHGGT VMNSLNYFGM DIATAGMSVL PPDAGGLEVI STLTANGYKK 360
  361 LVLNEQGKIV GMLTLGETDT AGIIFGLMRD QSDVRPIKDN ILNENFGLAY LPADSREEHL 420
  421 HGNTSGRVAP ADFKH

Type	Start	End	Confidence
Signal Peptide	1	20	0.76
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	435	0.99