YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57224128, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLENIPLNDI LKILLVLVLV TSALVLWQRS LTSLFKTYAL QSLLVALVAL AFFIHDSHLT  60
   61 LLFIALLTLF GKVFLIPRIL NRILFQMNIR RDLEFRFLYP VSSLIVSILL VFGVYQVFSS 120
  121 LLGEVMPERL FTLGAVIGVS MALMGMMVIF SRKKMLTKIV GYLSMENGAI LFGLFVAELP 180
  181 FILEILVLID LVILVLLLTV LAFGIDSTIE DFHPRFTPLG EWFKKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.66
Transmembrane Helix	10	27	0.91
Cytoplasmic	28	33	0.71
Transmembrane Helix	34	54	0.77
Non-Cytoplasmic	55	58	0.73
Transmembrane Helix	59	76	0.93
Cytoplasmic	77	96	0.84
Transmembrane Helix	97	118	0.93
Non-Cytoplasmic	119	129	0.88
Transmembrane Helix	130	150	0.96
Cytoplasmic	151	158	0.88
Transmembrane Helix	159	179	0.87
Non-Cytoplasmic	180	185	0.65
Transmembrane Helix	186	207	0.89
Cytoplasmic	208	226	0.89