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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78035751, gi|...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMNDLTKNL LLWVVVAVVL MVVFQSFSPR MAGGVGADSI TYTQFLKEVD SGRVKSVDYT  60
   61 DETNLAVNAI RFKRTDGSEA TVYGPRDDKL VDVLYSKNIE MTRQKPSTGP GFWSLVLNFL 120
  121 PVILIIGFWL FIMRQMQGGG GGAKGAMSFG KSRAKLQGED QIKITFADVA GCDEAKEEVG 180
  181 ELVDFLRDPT KFTKLGGKIP RGVLMVGPPG TGKTLLAKAI AGEAKVPFFS ISGSDFVEMF 240
  241 VGVGASRVRD MFEQAKKHAP CIIFIDEIDA VGRHRGAGLG GGHDEREQTL NQLLVEMDGF 300
  301 EGGEGVIVIA ATNRPDVLDP ALLRPGRFDR QVVVGLPDVK GREQILRVHM RKLPLAEDVV 360
  361 PMVIARGTPG FSGADLANLC NEAALFAARG SEKEVRMDHF DRARDKILMG AERRSMAMSE 420
  421 DEKTLTAYHE AGHAIVGRLV PEHDPVYKVT IIPRGRALGV TMYLPEGDRY SMNRVAIESQ 480
  481 LCSLYGGRVA EELIFGGDKV TTGASNDIER ATKMARNMVT KWGLSDELGP VAYGEEEDEV 540
  541 FLGRSVTQHK NVSDETARKI DEVVRSILDK AYSKTKTILT ENLDKLHAMS QLLLQYETID 600
  601 VPQIDAIMEG REPPPPAGWG KSDKDGGNNN DKGSPRPLPP IAGPAEQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle