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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP312_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLSADALG LLLKNAISAS SMRLGRVVHA RIVKTLDSPP PPFLANYLIN MYSKLDHPES  60
   61 ARLVLRLTPA RNVVSWTSLI SGLAQNGHFS TALVEFFEMR REGVVPNDFT FPCAFKAVAS 120
  121 LRLPVTGKQI HALAVKCGRI LDVFVGCSAF DMYCKTRLRD DARKLFDEIP ERNLETWNAF 180
  181 ISNSVTDGRP REAIEAFIEF RRIDGHPNSI TFCAFLNACS DWLHLNLGMQ LHGLVLRSGF 240
  241 DTDVSVCNGL IDFYGKCKQI RSSEIIFTEM GTKNAVSWCS LVAAYVQNHE DEKASVLYLR 300
  301 SRKDIVETSD FMISSVLSAC AGMAGLELGR SIHAHAVKAC VERTIFVGSA LVDMYGKCGC 360
  361 IEDSEQAFDE MPEKNLVTRN SLIGGYAHQG QVDMALALFE EMAPRGCGPT PNYMTFVSLL 420
  421 SACSRAGAVE NGMKIFDSMR STYGIEPGAE HYSCIVDMLG RAGMVERAYE FIKKMPIQPT 480
  481 ISVWGALQNA CRMHGKPQLG LLAAENLFKL DPKDSGNHVL LSNTFAAAGR WAEANTVREE 540
  541 LKGVGIKKGA GYSWITVKNQ VHAFQAKDRS HILNKEIQTT LAKLRNEMEA AGYKPDLKLS 600
  601 LYDLEEEEKA AEVSHHSEKL ALAFGLLSLP LSVPIRITKN LRICGDCHSF FKFVSGSVKR 660
  661 EIIVRDNNRF HRFKDGICSC KDYW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle