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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAD2H_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLPSLALIV GAAAFSPNPD ERRAAEQSLN QLQHTPQHLI RILQIIVDGG SDLSVRQSAS  60
   61 IHFKNFIAKH WEPHSGDQNI ILPSDKNVVR NQILVFVSQV PPILRVQMGE CLKTIIYADY 120
  121 PEQWPELLDW VKQNLQKPQV YGALFVLRIL SSKYEFKSDE DRAPIHRVVE ETFPHLLNIF 180
  181 NNLVHVENPS LEVADHIKLI CKIFWSCIYL ELPRPLFDPN FFNAWMGLFL NILERPVPVE 240
  241 GQPEDPELRK SWGWWKAKKW IAHILNRLYT RFGDLKLQNP DNKAFAQMFQ INYAAKILEC 300
  301 HLKLLNAIRI GGYLPDRVIN LILQYLSNSI SKSSMYNLLQ PHLNTLLFEI VFPLMCFNDN 360
  361 DQMLWDEDPH EYVRKGYDII EDLYSPRTAS MDFVTELVRK RGKENFPKFI QFVVDIFKRY 420
  421 NEASLENKPY RLKDGALLAV GTLCDKLRQT EPYKSELENM LVQHVFPEFS SPAGHLRAKA 480
  481 AWVAGQYANI DFSDQSNFSK ALHCVISGMC DLELPVRVDS VFALRSFIEA CKDLDEIRPV 540
  541 LPQLLDEFFK LMKEVENEDL AFTLETIVYK FGEEISPYAL GLCQNLASAF WRCIDTDNGD 600
  601 DETDDAGALA AVGCLRAIST ILESISSLPH LYGQIEPQLL PIMRKMLTTD GQDVFEEVLE 660
  661 IVSYITTFSP TISLEMWSLW PLMMEALVDW AIDFFPNILV PLHNYISRGT GHYLTCKEPD 720
  721 YQQNLWNVIS VLMANKNIDD SDLEPAPKLL GIVLQTCKGQ VDQWVEPYLR ITLDRLRGAE 780
  781 KSSFKCLLVE VVANAFYYNT PLALGILQRF GIATEIFTLW FQMLQEKKKS GARSNFKREH 840
  841 DKKVCILGLT SLFSLPAGQL PGEVLPHVFR ALLELLVAYK DQLAEAAKAE EEEEDEDGDD 900
  901 DDMDEFQTDD EDEDGDDENP DETDGSTLRK LAAQAKDFRS YSDDDDFSDD DFSDDEELES 960
  961 PIDEVDPFVL FMDAVTAMQV SDSPRFQSLT QTLDPHYHGL ASTIAQHTEL RRAEILKEKL1020
 1021 EKQSSATVAS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle