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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78363443, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNDMLKNIL IWTVVATVML SIFNHFSGQK IGGSSQLAYS DFIDRVRDGS VSQVSIEGGT  60
   61 IHGVYTDGKA FTTYNPGDAG LMGDLLNNNV KVVARPPEKQ SVLMQIFISW FPMLLLIAIW 120
  121 IFFMRSMSGG MGGKGGPMSF GKSKARMLSD DQVKVNLDDV AGADEAKEEV GEIVDFLRDP 180
  181 EKYQNLGGNI PRGVLMVGPP GTGKTLLAKA IAGEAKVPFF SISGSDFVEM FVGVGASRVR 240
  241 DMFEQAKAHS PCIIFIDEID AVGRSRGAGM GGGNDEREQT LNQMLVEMDG FEGNEGVIVI 300
  301 AATNRADVLD PALLRPGRFD RQVTVGLPDV RGREQILKVH MRKVPLADDV KPALIARGTP 360
  361 GFSGADLANL VNEAALFAAR NNDRLVTQKH FEKAKDKILM GVERKSMVMS EEERKLTAYH 420
  421 EAGHAIVGYL VPEHDPVYKV SIMPRGRALG VTMYLPEEDS YSYSKRKLES QLSSLYGGRI 480
  481 AEEMIFGKEA VTTGASNDIM RATQIARNMV TKWGLSEKLG PLMYEEEDNG SLMGTSRNAN 540
  541 VSSEISNEID LEMRHFIDRN YERAEKILTE NISVLHAMAA ALLQYETIDS DQIKKLMAGE 600
  601 EPGQPKDWED RSDDHDGTAQ KGAEVDATPT SDTKTDLSSD DSVENGEPKL H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle