YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996256, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDFLVIGGG IAGLAAAYEL FREGQDFILI EENDYFGGKV KTIEREGFII EGGPDCFLSE  60
   61 KPQVFQIARE LKFEDKIIGT NDEFKGTYIL SGGRLHELPE GLMMMVPTRI IPFALSPLIS 120
  121 WPGKIRMGMD LFIPRKRDDE DESLYSFVTR RLGREALEKI AEPLIGGIHA GTPEEMSVKA 180
  181 SFPRFVEMEK KYGSLIRGML AAKKASSNRP KTKSNTTYFM SFQKGMGELA ENIVKNLPDY 240
  241 KLFTGKKAVK VTYQKGKYRT YLTDGEIIES KHVILAVPAY NAAELLEEIN KDLAELLAQT 300
  301 GFASSATITL AYRKEDWPFK VNTFGFVVPR IEKRHLMALT YSSVKWSYRV PDDSYLLVRG 360
  361 FLGGATNQND VFLPEKEMVE LVLAEIKDIL GVTAKPLFYE IFRWPRGMAQ YKVGHLERLA 420
  421 KIEELVFEMP GLALAGSSYR GIGVPDCIKS GREAVRNLLN K

Type	Start	End	Confidence
Signal Peptide	1	17	0.64
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	461	0.99