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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77996034, gi|...
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNYKTIYKK RTGALFLLLA AFASIIIVRL FYLQVIKAET LRSEALADRQ SEIILPPQRG  60
   61 NIYDRNGNLL AQSISVESLV ANPKQLMKYY YDETKEAPPE DKEKDGKSLK PKPLGLLVDK 120
  121 LSKILNLDEK AKENLRQKLS NTRSSFIWIK RKLSYDEAKA LKKLLADKED EVYTFGLELV 180
  181 EETQRYYPHN DFAAHLLGYA GTDNQGLAGL ELSLDKYLKG IPGRLVTERD ARGLEIPESS 240
  241 SLYIPARPGN NVYLTIDETI QYFVERELNN IESQLKPALA MIIVMDPKTG EILGMGSRPN 300
  301 FNPNEFAKYP AEVREKNFAI WYNYEPGSTF KIITSAAALE EGVVHPQDRF YDPGYIVVNG 360
  361 RKIRCWSKTP HGAQSFAEVI QNSCNPGFVK VGLSLGKERF YKYIRSFGFG EKTGIELPGE 420
  421 QKGLIIPEDK VTNVNLATIS IGQSIAVTPI QLIRAVCAVA NGGKLVEPHV VKKIVDQAGN 480
  481 IVLENKPRYL KRVISEETAR TLRELLERVV LKGTGTKAYI KGFRVAGKTG TAQVVSPTGG 540
  541 YAPGKYVASF VGFAPANDPK FAALVVIVEP STGVYYGGQI AAPVFKSLGE DILRYMGVKP 600
  601 QEDPEPAKNE GPIEVFPEEV RVPALEGLTL WEAQKKIIEN GLIFNVEGHG PKVVKQSPEP 660
  661 GVIVPEGTEI TLTLGQGKGD TDKVIVPELT GLTFDEVSGI LKRLGLGFRY IGSGVAVEQN 720
  721 ISPGTVVPPG TVVEVKFKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle