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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77995859, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKGCRSNLR GQALAFLLVF LFSIFFGFRL PVLAASYGVV TASTLNVRSG PGINYAKIGV  60
   61 LSRGQKVEIT AKTGEWFKIR YKNGYGYVSG KYISPVVGSS RSTQASRTGI VTATILNVRT 120
  121 TPSTSAAIAG KLAKNTRVEI YKEQNGWYYI KAGSIAGWVV KTYIKVTETS RGTTPTPPQS 180
  181 STNTSIKTIS GVYAVKATSL NLRSGPGTSY SVIKTLPQGT KVEGLQVSGD WMKVKAGSTT 240
  241 GWVAKAYLVP YVAETSRGDG LRIIKTVYPQ VDPVNVFNGA GFSTGVKATI SGEKSFGVLE 300
  301 EKDGWYRLAL AGREIGWAEK AYFSDTPVEP VHPVQIKGET APASLTWQIT TTANLTYTLS 360
  361 DDKLTAKIVL ENGQIDNLTA PDLSFPVKSL TTATENGNVV VNFAGFVPLN LTVEKINGGY 420
  421 NVRIFPEPVL SGKKIVLDPG HGGSDPGTIG KVYGIKEKDV NLDIALKLKG YLEALGATVY 480
  481 MTRTGDTYPT LSKRVEYANG LSADLFLSIH QNSVGSPAYY SANGTQVYYY PDPNNQAQEK 540
  541 ALADNLMVAL NEVLNSKNKG IYTNQGFYVI KYTEMPSALV EVGYLSNAEE EKKLSTPEYR 600
  601 TKAAAALAQG ITKWFLGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle