YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MURD_CARHZ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGLYTNKRI LVVGAGKSGR AAAAFLIKRG AKVVLTDKKM SLPVDEELKK LAEEGVELVL  60
   61 GGYPLVKDWE LLVVSPGVPL TEEPIAYSLK EGIPVLGEIE LAYKELKAPI IAVTGTNGKT 120
  121 TTTSWIGEVL KIAGFKTLIA GNIGYPLIEA VEEEWDAVSL EVSSFQLETI KSFKPKVAVL 180
  181 LNLTPDHLDR HKTLEGYLEA KARIFINQDR TDVTVLNYDD PRIRSLGRKT PGRVFYFSQK 240
  241 EELEEGVFVK KGKIVVRSLG VEEEIIDIEN LPLPGPHNLE NALATVAACW SFGVSGKNIE 300
  301 RGLRNFQGVA HRLEKVAEIN GVLYVNDSKG TNPDSTIKAL NSYERPIVLI AGGRNKGNSF 360
  361 GELAREIREK VRFTILVGEC REELKEALEM VGYDKYVVAE SFEDAVKKAK ELARPGDVVL 420
  421 LSPAAASWDM FKNYEERGEL FKRLVLNMVE G

Type	Start	End	Confidence
Signal Peptide	1	21	0.56
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	451	0.99