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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATL4_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELWLGRLWL YVMLLLLLLQ LCQDQELLGP SLQTPSEEDQ VPEGLWGPWG RWASCSQPCG  60
   61 VGVQRRSRTC ELHPALSLPP RPPRHPEAPQ PRGQGSRPQT PRDPQSLYRP QPRGRGGPLR 120
  121 GPASQVGREE TQEPRGAQRF RVRDPIKPGM FGYGRVPFAL PLHRSRRLAH KPGQPKDSST 180
  181 AEETLPSQPP STEPASEKHS PHMQPPELRA QSRSPSAETP RSGTAQTEVP SRTSSAPSDM 240
  241 GIPAPTSSFR DSRSFQGSPE PRMPTSQGAE RQPHPFSPVT RSQLSRRHWR PPGSPHRSPD 300
  301 GWLPLTRDSS PHWSLFAPSS PTPECSGESE QMRACSQEPC PPEQPDPRAL QCAAFDSQEF 360
  361 MGQLYQWEPF TEVQGSQRCE LNCRPRGFRF YVRHTEKVQD GTLCQPGSLD ICVAGHCLSP 420
  421 GCDGILGSGR RPDGCGVCGG DGSTCRLVSG NLTDRGGPLG YQKILWIPAG ASHLRISQFR 480
  481 PSSNYLALRG PGGRSIINGN WAVDPPGSYA AVGTVFQYNR PPREEGKGET LSAEGPTTQP 540
  541 VDVYMIFQED NPGVFYQYVT SAAPESPSTM PPALQLQPEM LRGEPLLPSA PRPVRAPGTL 600
  601 QRQARIPQVP PPTHVRTAMG SSAGYWKQVG HSECSASCGK GVWRPIFLCV SRESGEELDE 660
  661 QSCAVGARPP ASPESCHRPP CPPYWEAGEW TSCSRSCGPG TQHRQLLCRQ EFGGGGSSVP 720
  721 PERCGHLPRP NITQSCQLRL CGHWEISSPW SQCSVRCGRG QRSRQVRCVG SNGHEVGKQE 780
  781 CASGPPPPPS REACDMGPCT TAWFYSDWSS KCSAECGTGI QRRAVVCLRS GETLQGDPEA 840
  841 GSTEQGCPLR SRPPDMRACS LGPCEKTWRW YTGPWSECSS ECGSGTQHRD IICVSKLGTK 900
  901 FNVTSPSNCS HLPRPPALQP CQGQACEDQW FSTLWSPCSQ SCQGGVQTRE VQCLSSNHTL 960
  961 SSRCPPHLRP SRKRPCNSQP CNQRPDDQCK DSSPHCPLVV QARLCVYPYY TATCCRSCAH1020
 1021 VLEQSQLEPA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle