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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74353691, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRIPGPRL LLLGLQLFVN AWSYNLDTRH AQSFLTQAGR HFGYQVLQFG DGVVVGAPGE  60
   61 GNSTGNLYHC HPSSGSCQPV HLGSNHTSKY LGMTMVTDAA KGSLLACDPG LSRTCDQNPY 120
  121 LSGLCYLFSQ SLGKPILQNR PAYQECMKGN VDLVFLFDGS QSLDKKDFEK IVDFMKDVMR 180
  181 KLSNTSYQFA AVQFSTECKT EFTFLDYIKL NKNPDVLLGN VTPMFLLTNT FRAINYVVTH 240
  241 VFKEESGARP DATKVLVIIT DGEASDNGNI DAAQDITRYI IGIGKHFSTT QKQEKLHIFA 300
  301 SKPVEEFVKI LDTFEKLKDL FTDLQRKIYA IEGTSKQDLA SFNMELSSSG ISADLSKGHA 360
  361 VVGAVGAKDW AGGFLDLHED LEGATFVGQE PLTSDERGGY LGYTVAWLTS RSSRPLLAAG 420
  421 APRYQHVGQV LLFQAPEAGG HWNQTQKIEG TQIGSYFGGE LCSVDLHQDG ETDLLLIGAP 480
  481 LFYGEQRGGR VSVYQRRRSL FEMVSELQGD PGYPLGRFGA AISALTDING DGLTDVAVGA 540
  541 PLEEQGAVYI FNGKPGGFSS QSSQRIPGTQ VSPGVRWFGR SIHGVKDLGG DRLADVVVGA 600
  601 EGQVIVLSSR PVVDIVTELS FSPDEIPVHE VECSYSASQE QKEGVKLKVC FQIRPLTSQF 660
  661 QGRLLANLSY TLQLDGHRTR SRGLFPGGSR ELGGNTFVTP DRSCMDFHFH FPICIQDLIS 720
  721 PINVSLNFSL LEEEGSPRDQ KGGRDMQPIL RPSIHAVTKE IPFEKNCGED KKCEADLALS 780
  781 PPARSGVLRL MSSASLAVEW TLRNLGEDAY WVRLDLDFPR GLSFRKVEML QPHSQIPVSC 840
  841 EELTEESSLL TKTLKCNVSS PIFKAGKQMT LQVMFNTLLN SSWGDFVELN GTVHCENENS 900
  901 SLGKDNSATT RIPVLYPVNI LTEDQENSTL YISFTPKGPK TQQVQHIYKV RIQPSAYDHN 960
  961 MPALEALVEV PQPHSEGPIA HTWTVHTDPL VTCHCEDLKK PTREAEPCLP GVQFRCPIVF1020
 1021 RQETFIRVAG TVELSEKIKA SSTLSLCSSL SVSFNSSKHF HLYGSKASKA QVLMKVDMIY1080
 1081 EKEMLHLYVL SGIGGLLLLS LIFLALYKVG FFKRKLKEKM EADGGVPNGS PGEDADPLAV1140
 1141 PGEETKDMGC LEPLRESDKD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle