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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71681190, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.63
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSDWLFCCP MLCLRVSVCA ARSVVTGTSR IVHSSRAPCR PLPSTWAPAA SRASPVSMFV  60
   61 TSFTTAAAFY ANYVSNITAI RCFGVYAGTA ILVNYILMVT WLPAVVVLHE RYLVNLLTCS 120
  121 RSQNHQSQGA ATFWTSLCQV VNKCLFSISE ASRIFFEKVL PCVVIKLRYL WLLWFLALTV 180
  181 GGAYVVCVNP KMKLPSLELS EFQVFRSSHP FERYDAEYKK LFMFERVNHG EDLHMPITII 240
  241 WGVTPIDSGD PLNPKNKGKL TLDTTFNIAS PASQVWILNF CQKLRNQSFV YQSEEQDFTS 300
  301 CFMETFKQWM ENQDCEEASV YPCCSQSTFP YRQDVFELCI KRAIMELDRS TIYHLDSKTP 360
  361 GPRFDINDTI RAIVLEFQST YHFTLAYEKM HQFYREVDTW IQEELRDAPE GLSYGWFVSN 420
  421 LEFYDLQDSL SDGTLIAMAL SVVVAFSVML LTTWNIIISL YAIISIAGTI FVTVGSLVLL 480
  481 GWELNVLESV TISVAVGLSV DFAVHYGVAY RLAPEPDREG KVVFSLSRMG SAIAMAALTT 540
  541 FVAGAMMMPS TVLAYTQLGT FLMLIMCISW AFATFFLQCM CRLLGPQGTC GQIPLPKKLQ 600
  601 CAERTSENQS TVNNQGKAGA CYTSKHEHYE LEPLAANVRN EGKASGEEQE ACTQLQNNIT 660
  661 SLHEDATLCA SHEEPKHEFE NGVQATEHSH LHQYAFNTRC TCENSMHQYI RERQRTACHP 720
  721 CGQSRETQCA TKQSNHLPAC LNRDMIHAPT NSGHFQHCTP SQISRPAAHR CFSGGCGMHA 780
  781 MHISQQQTET ESHISACVPS SSPPESQNRP AHLQFPDVQR CSSPDTTGVC TLNHDTQNTG 840
  841 ELAINSQSPQ KIPWNHLKTK ANGTCGLQDC REVVPEDSIG CRVDKEKTVS PKKFNCFKKN 900
  901 VNAKCNSVEF HKTRTSVPTI AINSKASSES LC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle