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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74353679
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRTKDLIWT LFFLGTAVSL QVDIVPSQGE ISVGESKFFL CQVAGDAKDK DISWFSPNGE  60
   61 KLSPNQQRIS VVWNDDDSST LTIYNANIDD AGIYKCVVTA EDGTQSEATV NVKIFQKLMF 120
  121 KNAPTPQEFK EGEDAVIVCD VVSSLPPTII WKHKGRDVIL KKDVRFIVLS NNYLQIRGIK 180
  181 KTDEGTYRCE GRILARGEIN FKDIQVIVNV PPTVQARQSI VNATANLGQS VTLVCDADGF 240
  241 PEPTMSWTKD GEPIENEEED DEKHIFSDDS SELTIRNVDK NDEAEYVCIA ENKAGEQDAS 300
  301 IHLKVFAKPK ITYVENQTAM ELEEQVTLTC EASGDPIPSI TWRTSTRNIS SEEKTLDGHM 360
  361 VVRSHARVSS LTLKSIQYTD AGEYICTASN TIGQDSQSMY LEVQYAPKLQ GPVAVYTWEG 420
  421 NQVNITCEVF AYPSATISWF RDGQLLPSSN YSNIKIYNTP SASYLEVTPD SENDFGNYNC 480
  481 TAVNRIGQES LEFILVQADT PSSPSIDRVE PYSSTAQVQF DEPEATGGVP ILKYKAEWKS 540
  541 LGEEAWHSKW YDAKEANMEG IVTIMGLKPE TRYAVRLAAL NGKGLGEISA ATEFKTQPVR 600
  601 EPSAPKLEGQ MGEDGNSIKV NLIKQDDGGS PIRHYLVKYR AKLASEWKPE IRLPSGSDHV 660
  661 MLKSLDWNAE YEVYVVAENQ QGKSKAAHFV FRTSAQPTAI PANGSPTAGL STGAIVGILI 720
  721 VIFVLLLVVM DITCYFLNKC GLLMCIAVNL CGKAGPGAKG KDMEEGKAAF SKDESKEPIV 780
  781 EVRTEEERTP NHDGGKHTEP NETTPLTEPE KGPVETKSEP QESEAKPAPT EVKTVPNEAT 840
  841 QTKENESKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle