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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73670079, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFMNNFLEL QASLYSLFVF IMMLIIISLF VYLVMSYYGN STDKTEKLKG FKYKNIILFI  60
   61 IILTIFFVAM YFVHESPIAW IVRGDALANS GNYKEAINAY DKAIELDPQN PEAWNNKGVA 120
  121 LSNLSNYEEA IKAYNKAIEL DPQNSLFWYN KGKTLYELGK QEESTKAYKE SLEASENAIE 180
  181 LDPRNSLAWY NKGSALQELG NYQEAITAYN KAIEIYPEYK EAWYKKGLAF YNSGNYEEAV 240
  241 KACNKTIELD PQNPRVWANK GNALSKLNSY EEAITAYNES IELDPQNSVA WNGLGFAVAS 300
  301 SGNYEEAIKF YNKAIEIDPQ NSEALSNKGF ALYNVGNREE AIKALDKAIE VNPQNAVAWY 360
  361 DKGSILKNLG NYEEAVEAFD KATELDPKKS SAWNNKGNAL SSLGNYDEAI KAYDKAIEID 420
  421 PQDPGPWNNK GIALSNLGSY EESIKAFDKA IEINLSSSVT WANKGLVLSI LGNYEGAIKA 480
  481 FDKSIEIDPR NSIAWVNKGN ALYNSGEYEG VITACDKAIE LDPKNLDAWT NKGKALSSLG 540
  541 DYEEAIKAYD KALEIEPQDP LTWNNREIAF GHLNNYEEAL RAHNREIVSD SEDPEVSWND 600
  601 KGLALYYSGN YEESVKAYDK AIELDPEYAD AWFNKGNSFF SLKNYEEAIK AYDKAIELKP 660
  661 QNSLAWNNKG LALNNSSYYA EALKSYDKAI ELNSQDSAAW NNKGNTLSSL YDYEGALNAY 720
  721 NKAVEINPQY SDAWYNKGNT LCSLGRYEEA VTAFNKTLEI DPHNSFAWCN KGIALSSLGN 780
  781 YEEAMKSFDK ALEIDSQNSL IWSNKGLALF EFGKYEEAVK AYNKTIEIDQ SNTETWNNRG 840
  841 SAFFLIGNYE EAMKNYNKTI ELDPEYSLAW YNRACLYSLI NDKEQSISDL KRAIEINPAY 900
  901 KEMARVDSKF EHLWDNEEFK KLLNITE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle