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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76657864
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.62
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRTAVMMAA SLALTGAVVA HAYYLKHQFY PTVVYLTKSS PSMAVLYIQA FVLVFLLGKV  60
   61 MGKVFFGQLR AAEMEHLLER SWYAVTETCL AFTVFRDDFS PRFVALFTLL LFLKCFHWLA 120
  121 EDRVDFMERS PNISWLFHCR IVSLMFLLGI LDFLFVSHAY HSILTRGASV QLVFGFEYAI 180
  181 LMTMVLTIFI KYVLHSVDLQ SENPWDNKAV YMLYTELFTG FIKVLLYMAF MTIMIKVHTF 240
  241 PLFAIRPMYL AMRQFKKAVT DAIMSRRAIR NMNTLYPDAT PEELQAMDNV CIICREEMVT 300
  301 GAKRLPCNHI FHTSCLRSWF QRQQTCPTCR MDVLRASLPT QSPPPPEPAD QGPPPAPHAP 360
  361 PLLPQPPNFP QGLLPPFPPG MFPLWPPMGP FPPVPPPPGS GEAVAPPSTS AGEPFGTTSA 420
  421 RGWKQGKQRP ASPAPGFPFP PPWMGMPLPP PFAFPPMPVP PAGFAGLTPE ELRALEGHER 480
  481 QHLEARLQSL RNIHTLLDAA MLQINQYLTV LASLGPPRPA TAANPTEETA PSAVAATSST 540
  541 SIPSSEATTP SPGASPPAPE PEKPSAPESA GTEELPEDGE PDAAELRRRR LQKLESPVAH 600
  601 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle