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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76650052
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVTKRESRG FDRNGSGTAG VRVHSAARPA GAASGSSVRP PAVTREPGTM QPDRSFQSFA  60
   61 SRYRQSSFTY DVKRDVYNEE NFQQEHRKKT ASSGNVDIDI STVSHHVQCR CSWHKFRRCL 120
  121 LTVFPFLEWM CFYRFKDWLL GDLLAGISVG LVQIPQVLML GLLARHLIPP LNVSYAAFCA 180
  181 SVIYGIFGSC HQMSIGTFFL VSALAINVLR TQPFNRGHLL LGTFIQADFS NTSFYENYNR 240
  241 SLSSVASVTL LTGIIQLSMG MLGFGFIVAY IPEAAISAYL AATALHVMLS QLTCIFGIMI 300
  301 SYNSGPIAFF YNIINYCLGL PKANSTSILL FLTAMVALRI NKCIRISFNQ YPIEFPMEVF 360
  361 LVLGFAAFSN KVNMATENSL MLMEMIPYSF LFPVTPDMSN LTEVLIESFS LALVSSSLLV 420
  421 FLGKKIASFH NYDVNSNQDL IAIGLCNVVS SFFRSYVFTG AVARTIIQDK TGGRQQFASL 480
  481 VGAGIMLLLM MKMARFFYRL PNAIVAGIIL SNVLPYLEAV YTLPSLWRQN QYDCLIWMVT 540
  541 FMSAILLGLD IGLVVAVTFA FFIITVQSHR TKILLLGQIP NTNIYRSFQD YREVANIPGV 600
  601 KIFQCCNAIT FVNVHYLKRK VLEEIEMVKM PLTEEEIYTL FSQNEEGAQR GKICRCYCNC 660
  661 DEPEPSPRVI YTERYEVQRG RESSFINLVR CSRFESMNTA QTMSEDQVPY ITSSSSQRNP 720
  721 NYEEVEKVWL SDDPSRSMTI TLPEASDTQV RATKLLPYST STILPSIHTI ILDFSMVHLV 780
  781 DARALVVLRQ MFSAFQNANI LVLIAGCHSF VVRSLEKNDF FDAGITKAQL FLTLHDAVLF 840
  841 ALSRKLPESS ELSVDESETV IQETFSETDK KEESRHKTNR SLIEAPRSKS PGFSLLPDPE 900
  901 MEEESDLDLY STIQMSKDHG LDLDLDLDRE VEPESELEPE SELDQETELE PEPEASPKPN 960
  961 RQKYWSLFRA IIPRSPTQTQ ARTQSVDRRH QNVKPYTSKA DTSEDALEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle