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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75702177, gi|...
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVKTLPPNS RPIEGELQLK DTQALVVRSS GTVSPERPQV LVTNNLEPET IVYDPVAVAE  60
   61 HYRHRPLQVL RRIFAVLGPT FSFVFGLWWD TKRGVVVKND RRRAIQLKEL LTQLGPAYIK 120
  121 IGQALSTRPD LVPPIYLEEL TRLQDQLPAF PNEIAYQFIQ EELGQSPEEV YAELSAQPIA 180
  181 AASLGQVYKG KLKTGEEVAV KVQRPDLRER ITIDLYILRG LAAWVQKKVK RVRSDLVGIL 240
  241 DELGDRIFEE MDYIHEGENA ERFFQLYGHI QDIYVPRIYW EYTNRRVLTM EWINGTKLTQ 300
  301 TAEISAQGID ARYLIEVGVQ CSLRQLLEHG FFHADPHPGN LLATPDGKLA YLDFGMMSEI 360
  361 KPPQRYGLIE AIVHVVNRDF EGLAKDYVKL DFLSPETDLT PIIPAFGKVF ANAQGASVAE 420
  421 FNIKSITDEL SELMYEYPFR VPPYYALIIR SLVTLEGIAI YIDPNFKVLS EAYPYVAKRL 480
  481 LTDPAPELRI SLRDLLFKDG RFRWNRLENL LRNARKNQDY DLNLVVNQGV DFLSSERGSF 540
  541 IRDKLVDEFL NGINALSKNV LHNFTYLLRE RVGITAINET PAATVEQQQT LEHIKNILNI 600
  601 LRETRGFDPS QLAPQVAQLA FNPGVQRLGQ QVANQLVQKA TVRLIRELLT AEEVKSSEIE 660
  661 YPGRRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle