YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71557111, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIRILERRM NITTFAKRLC LLVPLIITPT VWAAEQMTPA APQLAAKSYV LMDATSGNVL  60
   61 VENNGDQRLA PASLTKLMTA YIATLEIRRG QIGENDPVTI SENAWRTGGS RMFIKVGSQV 120
  121 TVSDLLHGII IQSGNDASVA ISEHIAGSED AFADMMNKTA GDLGMTNSHF MNPTGLPNPE 180
  181 HYSSAHDMAI LARAIIHEDP AHYAIYSQKE FFWNGIKQPN RNLLLWRDKT VDGLKTGHTD 240
  241 EAGYCMVSSA VRDGMRLIAV VFGTNSEQAR AAETQKLLTY GFRFFETQNF YQKGTELAQA 300
  301 TVWKGTERQV KAGLAEDLSM TMPKGDMKKL SASMTMNPQL VAPIAKGDVI GKVEVKKDDQ 360
  361 VVHTANLIAL DAVEEGGIFR RVWDSIRLFF YGLFN

Type	Start	End	Confidence
Signal Peptide	1	33	0.99
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	395	0.99