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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74001569
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTRYLIAGS PSVPLGCIAA GGWGPVSLAD RNRLRQSRNP QKYFAMDTED EENMSSSSTD  60
   61 VKESCGLDSV PPKDGSAPGP GEGAPLSNGG SGGASRKRPL EEGSNGHAKF RLKKRRRPPG 120
  121 PALPKNALMQ LNEIKPGLQY ALLSQTGPVH APLFVMSVEV NGQVFEGSGP TKKKAKLHAA 180
  181 EKALRSFVQF PNASEAHLAM GRTLSANTDF TSDQADFPDT LFNGFETPDR SEVPFYLGSN 240
  241 GDDSFSSSGD LSLAASPAPA GLAQPPLPGP PPFPPPSGKN PVMILNELRP GLKYDFLSES 300
  301 GESHAKSFVM SVVVDGQFFE GSGRNKKLAK ARAAQSALAT IFNLHLDQTP SRQPIPSEGL 360
  361 QLHLPQVLAD AVARLVLDKF GDLTDNFSSP HARRKVLAGI VMTTGTDVKD AKVISISTGT 420
  421 KCINGEYMSD RGLALNDCHA EIIARRSLLR FLYTQLELYL NNKDDQKRSI FQKSERGGFK 480
  481 LKETVQFHLY ISTSPCGDAR IFSPHEPILE EPADRHPNRK ARGQLRTKIE SGEGTIPVRS 540
  541 NASLQTWDGV LQGERLLTMS CSDKMARWNV VGVQGSLLSI FVEPIYFSSI ILGSLYHGDH 600
  601 LSRAMYQRIS NIEDLPPLYT LNKPLLSGIS NAEARQPGKA PNFSVNWTVG DAAIEVINAT 660
  661 TGKDELGRAS RLCKHALYCR WMRVHGKVPS NLLRSKITKP NMYHESKLVA KEYQAAKACL 720
  721 FKAFIKAGLG AWVEKPTEQD QFSLTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle