YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74001418
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHLHISGPC LPSSMSSPTM PFSGFPSSRH SPGRFSSIML SGKPTRPPKQ DCVPLSWAPA  60
   61 KPSCPQHSNG GRRNLYGDTR DTPDTWSELE QEATHAPSSE RLCYGLEKFV CNPNVSRGPL 120
  121 RGPPAQESTQ AKAQEGDGRT KTKRRERLLA LDQEPSCSDP PAAGHSGAVM FGLRGRCQRP 180
  181 EDFGVALPGR GWLQRQPPAG LGCTCRVHSR TCSSELDTRS TRWAECEFTA TRLNFRCIFD 240
  241 KRHDLGQKAF SESSSSCSRT FTPRMIPSNA TEVMPFLTTL WQGTVEEGGN NMSGLARRSP 300
  301 GRDDSQLAAL YVLMVLGFFG FFTLGIMLSY IRSKKLEHSH DPFNVYIESD TWQEKDKAYC 360
  361 QARVLESYKA CYVIENQLAV ERPNTHLPEI KPLS

Type	Start	End	Confidence
Non-Cytoplasmic	1	306	0.90
Transmembrane Helix	307	330	0.92
Cytoplasmic	331	394	0.93