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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-18
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKTLLFILI FFNIPIIAIE EIPDIKENGE KSSYTQFDNG AKLEVNKEHK RVIKIGHIGA  60
   61 VGVMPNDARI LNISKENLIE EGLVGDDIEF EIVSRQACSE SFEGVAVAAE LYHVHQVRAF 120
  121 IGPYCAAELE AVTKMATFWN IPIISYSSVP NAVSDRSVYK TLARVSSKNT NSIAEATVAL 180
  181 LLHYKWLKVA IATNTGSTAF ERVSIFEEIM HREGVTIVKK VMFDENTDAN EMMNSGQLGD 240
  241 LAANARIIIC LFSSTKELSK EFMQATYTMR MNNAEYAYII PWLQSGTKDL TPWIGADGEM 300
  301 LQRVKDHYAN AIIVDDVNGF DDSVVSSFVE KIEKHGMQKS DIDVTNINGY LHLFDSLKLY 360
  361 ALAIRKVLNE TDNEAYVTNG QFIWNRMRRM KFEGVVSRSS SEENKDAGAI GTVLMDDVAD 420
  421 RAPIFSAFYI SPNRDKVMKM VNMESELISN CDGLKNKSGC FQLKINDIKS GFWPSEDGSM 480
  481 PLDEPICGYR GQRCSYLLEI SVGSLIILLI LISVVFFFLF RYCENKQLEK MPWRIFHDDL 540
  541 QFIDEEQVKS MMSVGSVTTK LSNIQTGQKQ HAIIGVNTHT TYHRYKQRRP IKFIKEDMQL 600
  601 LTQMKQAVHD NLNPFLGAAF NEKEEMLVLW KFCSRGTIQD IIYNANVVLD EKFHGAFVRD 660
  661 ITLGLEYLHA SPIGYHGSLT PWCCLIDRNW MVKLSDYGIA NPLERWEKQG AIEIAAAKDS 720
  721 DDKSQASQAT SIIYMAPELL KNRETNKRRG MDQSWVKQSM LRRQAGDIYS FGMVMYEILF 780
  781 RSLPFRDNTN ISELVDYLAD GSKTVSPEIQ NQMGLHPDLN ALLRDCWSEN PEIRPSIRRV 840
  841 RLNTEMVLKT KGSLVDQMMK MMEQYANNLE KLVAERTGML EEANIRADQL LTQLLPAYVA 900
  901 NELKMGRSVA PKLYSSATIL FSDIVGFTTI CSGSTPLEVV NMLNGLYTGF DECITRNKSY 960
  961 KVETIGDAYM VVSGIPEENE YNHSRNIANT ALDMRQYLTG YQIPHRPTHR VRCRWGFHTG1020
 1021 SVAAGVVGLT CPRYCLFGDT VNVSSRMEST GTPGMIQMSE EAHMHIRAHH PVFTTTERGE1080
 1081 VQVKGKGTCR TFWLEDRVGD ASTTNYIQNV EGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle