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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85676514, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKFTLNIFT LSLGLAVMPM VEAAPTAQQQ LLEQVRLGEA THREDLVQQS LYRLELIDPN  60
   61 NPDVVAARFR SLLRQGDIDG AQKQLDRLSQ LAPSSNAYKS SRTTMLLSTP DGRQALQQAR 120
  121 LQATTGHAEE AVASYNKLFN GAPPEGDIAV EYWSTVAKIP ARRGEAINQL KRINADAPGN 180
  181 TGLQNNLALL LFSSDRRDEG FAVLEQMAKS NAGREGASKI WYGQIKDMPV SDASVSALKK 240
  241 YLSIFSDGDS VAAAQSQLAE QQKQLADPAF RARAQGLAAV DSGMAGKAIP ELQQAVRANP 300
  301 KDSEALGALG QAYSQKGDRA NAVANLEKAL ALDPHSSNND KWNSLLKVNR YWLAIQQGDA 360
  361 ALKANNPDRA ERLFQQARNV DNTDSYAVLG LGDVAMARKD YPAAERYYQQ TLRMDSGNTN 420
  421 AVRGLANIYR QQSPEKAEAF IASLSASQRR SIDDIERSLQ NDRLAQQAEA LENQGKWAQA 480
  481 AALQRQRLAL DPGSVWITYR LSQDLWQAGQ RSQADTLMRN LAQQKSNDPE QVYAYGLYLS 540
  541 GHDQDRAALA HINSLPRAQW NSNIQELVNR LQSDQVLETA NRLRESGKEA EAEAMLRQQP 600
  601 PSTRIDLTLA DWAQQRRDYT AARAAYQNVL TREPANADAI LGLTEVDIAA GDKAAARSQL 660
  661 AKLPATDNAS LNTQRRVALA QAQLGDTAAA QRTFNKLIPQ AKSQPPSMES AMVLRDGAKF 720
  721 EAQAGDPTQA LETYKDAMVA SGVTTTRPQD NDTFTRLTRN DEKDDWLKRG VRSDAADLYR 780
  781 QQDLNVTLEH DYWGSSGTGG YSDLKAHTTM LQVDAPYSDG RMFFRSDFVN MNVGSFSTNA 840
  841 DGKWDDNWGT CTLQDCSGNR SQSDSGASVA VGWRNDVWSW DIGTTPMGFN VVDVVGGISY 900
  901 SDDIGPLGYT VNAHRRPISS SLLAFGGQKD SPSNTGKKWG GVRADGVGLS LSYDKGEANG 960
  961 VWASLSGDQL TGKNVEDNWR VRWMTGYYYK VINQNNRRVT IGLNNMIWHY DKDLSGYSLG1020
 1021 QGGYYSPQEY LSFAIPVMWR ERTENWSWEL GASGSWSHSR TKTMPRYPLM NLIPTDWQEE1080
 1081 AARQSNDGGS SQGFGYTARA LLERRVTSNW FVGTAIDIQQ AKDYAPSHFL LYVRYSAAGW1140
 1141 QGDMDLPPQP LIPYADW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle