YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EG12273
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGKSCSRW FAPLAALLMV VSLSGCFDKE GDQRKAFIDF LQNTVMRSGE RLPTLTADQK  60
   61 KQFGPFVSDY AILYGYSQQV NQAMDSGLRP VVDSVNAIRV PQDYVTQSGP LREMNGSLGV 120
  121 LAQQLQNAKL QADAAHSALK QSDDLKPVFD QAFTKVVTTP ADALQPLIPA AQTFTQQLVM 180
  181 VGDYIAQQGT QVSFVANGIQ FPTSQQASEY NKLIAPLPAQ HQAFNQAWTT AVTATQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	236	0.99