YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73975552
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLILVFGAL LGHIYCQETF VGDQVLEITP RNEEQIKHLV ELEAEEHLQL DFWKLPTIPG  60
   61 ETAHVRVPFV SIQAVKVFLE SQGIAYSTMI EDVQVLLDKE NEEMLLNRRR QRNGNFNFEA 120
  121 YHTLEEISQE MDTLAAQYPG LVSKVNIGQS FEKRPMNVLK FSTGGDKPAI WLDAGIHARE 180
  181 WVTQATALWT ANKIASDYGN DPSITSILDT MDIFLLPVTN PDGYVFSQTK NRMWRKTRSK 240
  241 VSGSFCVGVD PNRNWDAGFG GPGASNNPCS DSYHGPHANS EVEVKSIVDF IKSHGKIKAF 300
  301 ITLHSYSQLL MFPYGYTCTK SDNFDELNEV AQKAAQSLAS LHGTKYKVGP ICSVIYQASG 360
  361 GSIDWSYDYG IKYSFAFELR DTGRYGFLLP ANQILPTAEE TWLGLKTIME HVRDHPY

Type	Start	End	Confidence
Signal Peptide	1	16	0.97
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	417	0.99