YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73972672
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPERSAQSF GYKYRQNSFT YDVKRDVYNE ETFQQEHRRK SISSGNLDID ITTFRHHVQC  60
   61 RCSWHKFLRC ILTIFPFLEW VCLYRFKDWL IGDLLAGISV GCVQVPQVLT FSLLTRQLIP 120
  121 PLNVCYAAFC SSLIYVIFGS CHQMSIGSFF LVSALMINVL RLYPFNSGHL VLGTFIKEDF 180
  181 SAPSFLVDYN RSLSVVASTT FLTGIIQLSM GLLGFGFLAT YLPEAAISAY LAAVALHVIL 240
  241 SQLTCIFGIM IGFHSGPISF FYNIVNYCAT LPKANSTSIL LFLTAVVALR INKCIRISFN 300
  301 RYPIEFPMEV LLILGFAAFA NKITMATETS KMLIDMIPYS FLFPVTPDLN ILPELILEAF 360
  361 SLALVSSSLL IFLGKKIASY HNYHVNSNQD LIAIGLCNVV SSFFRSCVFT GAIVRTIIQD 420
  421 KSGGRQQFAS LVGAGVMLLL MVKVGRFFNE LPNAVLAGII LSNILPYLEI IYNLPSLWRQ 480
  481 NQYDCIIWLV TFTSAIFLGL DVGLLVSIAF AFFIITVRSH RTKILLLGQI PNTNIYRSFN 540
  541 DYREVTNLPG LKIFQCCNSI TFVNVDHLKH KLLKEVEMVR VPLKEEEMFR LFNQSEEGSQ 600
  601 EERICQCFCN CDELEPPPRI VYTDRFESRR DHDSSSINLI RCSRFESMNM SQSISDDQGP 660
  661 YTISSMPHRN HGQNYEDMDK AWLSNNPSRN NSMPLPGTAE NQERRRSFLP HSDSSLPSIH 720
  721 TIILDFSMVH FVDSRASVSL RQMCNAFQNA NILVLISGCH SSVVRAFERN DFFDAGITKA 780
  781 QLFLTLHDAV LFALSRKFPE SSELSMDESE TVIQETFSET DKNEESKHKM SSGLLEVSKN 840
  841 INPDYTMMQR PITEEDLELD LELEPTLESE QETGLDLELD LDHEMEPESE LELEPEPELG 900
  901 PRLEMEPESE SMPRPRAQTF PRQQYWPLYQ SMPPGSPSQA RPRTQSLERR HQGLNSYSPK 960
  961 GNNT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle