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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83765342
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSNPPDCKS SSVMMPLASQ RLPIEASPDH QRRYRPSRLR SPWPCSILTA FTTLVASIFL  60
   61 FFILRSFALR QTGGDGCGVP VMSPTFIRMV GFDTEHTRFA SKYNLYLYRE GGVDPYSQEN 120
  121 LGLNGVPVLF LPGNAGSYRQ VRSLAAEASR HYYDVVRHDE DRLNAGTRSL DFFMIDFNED 180
  181 MAAFHGQTLL DQAEYVNEAV AYILSLYHDP RRSRRDPELP DPSAVVLVGH SMGGIVARTA 240
  241 LTMTNYQANS VNTIVTMSAP HAKPPVSFDS DIVQTYKQIN DYWREAYSQT WANDNPLWHV 300
  301 TLISIAGGSR DTVVPSDYAS ISSLVPETHG FTVFTSTIPD VWIGMDHLSI TWCDQFRKAI 360
  361 IKSLFEVVDV RRATQTKPRA ERMRIFKKWY LTGMETVAER TLPRKGVSGK KFTLLTNQQF 420
  421 DKSGDHGSLE VLFCSVFPLQ NGKPATAFSM NMDFSGGTSG STRLACKNAA EDGIHLPAST 480
  481 PSSKRPYDRV QPFSYLQYDL EDLAEHQFVA VVDKANSPTK GFVLAEFSDS SDSVIRARLG 540
  541 LGSLLSAGLK VRLPANRPML TELQIPAVHS SLLDYRLKII RKNHGQQQEL FAPLLRQSVA 600
  601 DPHESKFFVN VKNVNVNLHG LAPFMPPPLR EQATLGGVSF HLWTDPSCDS TIDISLSVDI 660
  661 AGSLGELVMR YRTVFAAFPL LVVALVMRKQ FQVYDETGYF ITFAEGLDSA LRSSLPMLLL 720
  721 AMSLLASSLA TSTKLPPTDD PFHWRTNSTE SPIDFTKNDL LLGSQDAFFW FLVPIFGLIS 780
  781 VGVCLVINYV ALALIFLLTS IYGFLRSKSG YIRRDEKGNL PIFSSASPRR RLVNSAILLA 840
  841 LVSTVIPYQF AYMVACIVQL ATSVRASWHA KEAKSTTHYN FANFAYSIFL LMLWILPINA 900
  901 LVLLVWAHNL VVHWFMPFSS HHNVLSIMPF VLLVEAMTTG TMIPRVTTRF KHVTSMLFFF 960
  961 IAIYSAIYGV SYAYLLHHLT NILAAWLVGI YFSASGFSLS RLWRVLEGDE AVQNPASGSH1020
 1021 TKKKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle