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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169764102
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTPIRHTY YIERVSGLGM DSVNTVSTCT RHFGALFLNF YSPITTGNIT STSSPRTSSS  60
   61 IPLQSLEYRF QPTPVQSVRA RESASEKGSR RSSLSAQSVE SEYSLWTDTG DLAEQLANEE 120
  121 DPLRVRLGEP LDREISSPSG SRARVKQLKR VHYPNESNLV TEQAEPEKTS IEIPRPPPRH 180
  181 ISRVERLLAV IMSPSNRQTA QMHGLVGKPL LYFTSVFVSL GVFLFGYDQG VMSGIITGWY 240
  241 FKDYFNQPSR AAIGTVVAIL EVGAFISSLL VGRIGDLIGR RRTILYGSIV FFIGGALQTF 300
  301 ANGLAMMMVG RIVAGLGVGA LSTIVPVYQS EISPPHNRGK LACIEFTGNI SGYAASVWVD 360
  361 YFCSFIDNNY SWRLPLLCQC IMGALLGLGS LVICESPRWL LDNDYDEEGM VVIANLYGQG 420
  421 DLHNDKARQE YREIKMDVLL QRQEGERSYT DMFKRYRKRV FIAMSAQALA QLNGINVISY 480
  481 YAPLVFESAG WAGRDAILMT GINAISYLAS TVPPWYLVDR WGRRPILLSG AVAMIVSLSL 540
  541 ISYFIFIDVA ATPTLTVILV MIYNAAFGAS WGPIPWLYPP EILPLSIRAK GASLSTATNW 600
  601 AFNWLVGELT PILQAVIKWR LYLVHAFFCA CSFVLVYFLY PETSGVRLED MDTLFGDATT 660
  661 AMPTPASQGE HGSLMSISSP VPSLDIRRQY SQFGPENAIP GLDIDPPTIN AGENAKVGQR 720
  721 GSRDGGGGRL EGLGGWISNM VSRHKGSSGQ RLQGTQYRRL GQDDENE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle