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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73963239
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGTVKMEGH ESSDWNSYYA DTQEAYSSVP VSNMNSGLGS MNSMNTYMTM NTMTTSGNMT  60
   61 PASFNMSYAN PGLGAGLSPG AVAGMPGGSA GSMNSMTAAG VTAMGTALSP GGMGAMGAQP 120
  121 AASMNGLGPY AAAMNPCMSP MGYAPSNLGR SRAGGGGDAK TFKRSYPHAK PPYSYISLIT 180
  181 MAIQQAPSKM LTLSEIYQWI MDLFPYYRQN QQRWQNSIRH SLSFNDCFVK VARSPDKPGK 240
  241 GSYWTLHPDS GNMFENGCYL RRQKRFKCEK QPGAGAGGGG GGGGGGGGGG GGGGAKGGPE 300
  301 SRKDPASAAN PSANSPLHRG VHGKAGQLEG APGPGPAASP QTLDHGGATA TGGASELKTP 360
  361 PSSAAPPISS GPGALVSVPP SHPAHGLAPH ESQLHLKGDP HYSFNHPFSI NNLMSSSEQQ 420
  421 HKLDFKAYEQ ALQYSPYGAA LKASLPLGSA SAETGPRSLS LSPHPPLAET FLGWWGARPR 480
  481 GLPAEAALEA CLGSRSGGDA RSWGFPRAFP PPVGSEACEH LARVRGVPGT CAPRLRMRVD 540
  541 PGRRVPGTGG QRRTAGILG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle