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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74228763
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASRAPRRR LEDLSVDEFL ASGFESGSES ELEGAAEAAA EERRARGAAW NRERRGARTS  60
   61 PGPAGRPRKG RASEHKDQLS RLKDRDPEFY KFLQENDRRL LDFSDSDSSA EEEEPFHSLP 120
  121 DTLEEASETE EDGGEDSDAL PRGLRSKKNE PVPVTLAMVE RWRQGSRHHL SPRLFHEVVQ 180
  181 AFRAAVATTQ GEQEAAETCR FQVADSAVFN ALVTFCIRDL CGCLQKLLFG KTPKDSNRLL 240
  241 PSSSPLWGKL RVDVKTYLSA VVQLVACLAE ATVSAAVLQH ISSLVPYYLT FPKQCRMLLK 300
  301 RMVVLWSTGE ESLRVLAFLV LIRVCRHKKE AFLGPILKQM YIMYVRNCKF TSPSTLPLIS 360
  361 FMQRTLTEML ALDPSVSYQH AFLYIRQLAV HLRNAMTAGK KETHQSVYNW QYVHCLYLWC 420
  421 RVLSTLGSSE ILQPLLYPLS QIIIGCIKLL PTARFYPLRM HCVRALTLLS QTIGTFIPVL 480
  481 PFILEIFQQV DFNRRPGRMS SKPINFSVIL KLSSTNLQEK AYRDGLLEQL CDLTLEYLHS 540
  541 QAHSIAFPEL VLPTVLQLKS FLRECKVANY CRQVRQLLEK VQENAQHIQS LRQSATFSVS 600
  601 DQMAVDAWEK QVREEGTPLT RYYGHWKKLR DREIQLEISG KERLEDLNFP EIKRRKVEDR 660
  661 KDEDRKELKD LFELDSSEGE DSTDFFERGV PRLPEAHQGL KED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle