YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607381, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKIAVVLF NLGGPASLRE VESFLFNMFN DSHIVSAPRP FRYFLAKAIS KLRARSSREI  60
   61 YTLMGGKSIV EQETAKQAIA LEELLNKNAE TGCSYKVFTC MRYSAPNALT VLGDIDEYKP 120
  121 CKVVLLPMYP QYSSATTQSS IEDWFSTSHK AGYSFWTDII WDYHSDEHFI AAHCKLISEA 180
  181 YEKALALNAR ARILFSAHSL PVSFIEKGDP YKQQLRQTVL SILQNMGLQS IDNTLCYQSK 240
  241 LGPVRWLEPS TKSELLRACN DNVSVVLVPI AFVSENSETL VELDIEYKAL VGEKKFIRVP 300
  301 TLGTDPKFIE CLCNLVLAKQ

Type	Start	End	Confidence
Signal Peptide	1	18	0.90
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	320	0.99