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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KATG_COLP3
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKSTLPIAA AISVALTSMV LPAKALAANE AKTNQFWWPD QLSLSPLRQH GAESNPYGEQ  60
   61 FNYAKEFASL DLAMLKKDIQ TTLTDSKSWW PADWGHYGPL MIRMAWHSAG VYRVHDGRGG 120
  121 ASGGQQRFAP LNSWPDNVNL DKARRLLWPV KQKYGRKISW ADLMVLSGNV ALESMGFKTF 180
  181 GFAGGRTDDW EPDLVYWGPE TAMLSDKRRD KKGKLKGPLA AVEMGLIYVN PEGPHGKPDP 240
  241 LLAANDIRMS FGRMAMNDEE IVALLAGGHT LGKAHGAKKP NGCVGAEPAA ADIEAQGLGW 300
  301 KNKCGTGVGA DTISSGLEGA WTVTPTQWSS NYLDNLMNFN WVLTKSPAGA KQWIPDNKAA 360
  361 ANLVPDAHIP NKRHAPIMFT TDIALKEDPQ FRKIVERFRA DPTQFDLAFA KAWFKLTHRD 420
  421 MGPRARYVGA EVPSEVLMWQ DPIPAINYQL ITDKDIKQLK KQITNSGLTT SELVRTAWAA 480
  481 ASSHRVTDMR GGANGARINL EPQNSWAVNN PKELGKVLAK LEGIQARFNK KSAKTKVSLA 540
  541 DVIVLGGATA IENAAAKAGN RITVPFSPGR ADASQAQTNV KSFNYLKPKA DGFRNFYTDD 600
  601 SYSSPAEMLV DKANSLGLNV PEMTVLIGGM RALDANYDAS SYGVLTNNPG VLTNDFFVNL 660
  661 LDMKTVWSKD KSNAGIYIGH DRASGTEKWQ ATPVDLIFGS SSELRAIAEV YASDDADKKF 720
  721 INDFTKAWVK VMQLDRFDLK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle