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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYR_COLP3
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIKNILSER VSAAMVAAGL PEGTNPAISL SNRPQFGDYQ ANGVMGAAKK LKTNPRELAT  60
   61 KVVAELDLDG IASKIELAGP GFINIHLDES WLAAQLNEVA QDDFIGVAQR GTTPGDESQT 120
  121 VVVDYSAPNL AKEMHVGHLR STIIGDAVVR ALEFRGDKVI RQNHMGDWGT QFGMLIAHLS 180
  181 DKLASDEVAE TALADLENFY REAKVRFDNE EGFADRARAD VVKLQSGDEA CAKLWQQFID 240
  241 ISITHSEEIY AKLNVSLKRS DIMGESAYND DLSTVVDELM AKKIAEESQG AKVVFINEMA 300
  301 NKDGEAPVFI VQKSGGGFLY ATTDLSACRY RSGKLAANRI IIFTDARQAL HFKQVEIVAR 360
  361 KAGLLPENVG YQHCPFGMMM GDDGKPFKTR TGGTIKLAEL LDESIVRAAA LIKEKNPDIT 420
  421 DTDLTEISKK VGIGAVKFAD LSKNRTSDYI FDWKTMLSFE GATAPYLQYA YSRIQSIFSK 480
  481 AGTVKNDAVI NIIEPQEKAL ALKLLQLEDV VDAVISECTP NLLCNYLYEL ASLYMSFYEA 540
  541 CPILKEGISG EVKASRLALC NVVADTLKQG LDILGIETME RM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle