YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71148097, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQQNNCDVL IIGSGAAGLT LALHLAQNAD VVILSKGPLN EGSTFYAQGG IAAVFDENDS  60
   61 VASHVEDTIV AGAGLCDEDT VRFTTENAKS CLEWLIDQGV EFDKEQSSKG ESRYHLTREG 120
  121 GHSHRRILHS ADATGQAIQT TLADQVRQHS RIRIFERFNA IDLICQASTT GNQPKQCIGA 180
  181 YIWNRNTEKV ESIYAQKTIL ATGGASKVYQ YTSNPDVASG DGIAMAWRAG CRVANMEFNQ 240
  241 FHPTCLFHPS AGTFLLTEAL RGEGAKLRRP DGSRFMPAFD ERAELAPRDI VARAIDYEMK 300
  301 RLGADCMYLD ISHKPSDFIK QHFPTIYEKT MSLGIDITKQ PIPIVPAAHY TCGGVMVDHQ 360
  361 GKTDISQLYA IGEMSYTGLH GANRLASNSL LECLVFARAA AIEIGETLVQ SNHYLTLPHW 420
  421 DDSRVTDSDE EVVIQHNWHE LRLFMWDYVG IVRTTKRLER ALHRVELLQQ EIEDYYQNFK 480
  481 VSNNLLELRN LVQVAELIIR CAMERKESRG LHYTLDYPDL LTTAKPTILS PV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle