YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71147545, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKPKVAIIT GAGRGIGAAT AKLFSSHGYA VCINYKSDEN SANKLAKSIR AEGGLCITVQ  60
   61 ADVSCESDVE RLFSTVDKAL GTVTVLVNNA GILKKQSRLE DMTAERINSI LTNNVTSYFL 120
  121 CCREAVKRMS TRHDGLGGVI VNVSSGAARS GSPNEYIDYA ASKGAIDTLT KGLSLEVAAE 180
  181 GIRVNCVRPG LIYTDMHADG GEPERIERLK EIIPLQRGGQ PEEVAEAIYW LASEKSSFST 240
  241 GNYLDLAGGL

Type	Start	End	Confidence
Signal Peptide	1	18	0.71
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	250	0.99